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test_rmsd.py fails with numpy 2.4 scalar conversion TypeError

Status: Open.

#156 In BioPandas/biopandas;

· chemonke opened on May 21, 2026

Biopandas PDB format cannot handle atomic charges

Status: Open.

#151 In BioPandas/biopandas;

· gate-tec opened on Mar 13, 2025

Adding possibility for a collection of structures

Status: Open.

#142 In BioPandas/biopandas;

· gezmi opened on Apr 29, 2024

[RFC] Enabling Cython-based PDB parser backend for speed improvements

Status: Open.

#139 In BioPandas/biopandas;

· a-r-j opened on Aug 29, 2023

read_pdb_from_list() not containing newlines

Status: Open.

#130 In BioPandas/biopandas;

· uros-sipetic opened on Jun 29, 2023

SettingWithCopyWarning

Status: Open.

#127 In BioPandas/biopandas;

· tommycarstensen opened on Apr 25, 2023

Unable to export PDB DFs with model_id columns

Status: Open.

#124 In BioPandas/biopandas;

· a-r-j opened on Apr 21, 2023

[Refactor] Reduce code duplication by using abstract base classes

enhancement

help wanted

Status: Open.

#117 In BioPandas/biopandas;

· a-r-j opened on Mar 27, 2023

Using SIFTS data for renumbering residues to match the Uniprot sequence resids

Status: Open.

#110 In BioPandas/biopandas;

· mrauha opened on Aug 18, 2022

Biopandas PDB output formatting leads to a ton of segments when reading with MDAnalysis: reason and my quick fix

bug

help wanted

Status: Open.

#109 In BioPandas/biopandas;

· mrauha opened on Aug 18, 2022

RMSD calculation for whole PDBs

enhancement

Status: Open.

#69 In BioPandas/biopandas;

· LivC193 opened on Oct 9, 2020

column 'line_idx' gets 'object' d_type for empty frames.

Status: Open.

#64 In BioPandas/biopandas;

· ZivBA opened on Jun 4, 2020